Iowa State University

Iowa State University

Dobbs Lab Software Page

Bioinformatics and Computational Biology

ZFNGenome: A comprehensive resource for locating Zinc Finger Nuclease target sites in model organisms (2012)
Reyon, D., Kirkpatrick, J., Sander, J., Voytas, D., Joung, J., Dobbs, D., & Coffman, C.
http://bindr.gdcb.iastate.edu/ZFNGenome/

RNABindR: Software for prediction of RNA Binding Residues in proteins (2006)
Terribilini, M., Honavar, V. and Dobbs, D.
http://bindr.gdcb.iastate.edu/RNABindR

PRIDB: The Protein-RNA Interaction Database
Lewis, B.A., Walia, R.R., Terribilini, M., and Dobbs, D.
http://bindr.gdcb.iastate.edu/PRIDB

ZiFiT: Software for engineering Zinc Finger proteins for specific Targets (2006)
Sander, J., Voytas, D. and Dobbs, D.
http://bindr.gdcb.iastate.edu/ZiFiT

INDUS: Intelligent Data Understanding System (2005)
Caragea D., Silvescu, A., Pathak, J., Bao, J., Andorf, C., Yan, C., Dobbs, D., & Honavar, V.
http://www.cild.iastate.edu/software/indus.html

PPIDB: Protein-Protein Interface Database (2006)
Wu, F., Zaback, P., Yan, C., Pathak, J., Dobbs, D., Honavar, V.
http://ppidb.cs.iastate.edu/




Dobbs Lab Web Page: http://ddobbs.public.iastate.edu