RNABindR: Software for prediction of RNA Binding Residues in proteins (2006)
Terribilini, M., Honavar, V. and Dobbs, D.
http://bindr.gdcb.iastate.edu/RNABindR
ZiFiT: Software for engineering Zinc Finger proteins for specific Targets (2006)
Sander, J., Voytas, D. and Dobbs, D.
http://bindr.gdcb.iastate.edu/ZiFiT
INDUS: Intelligent Data Understanding System (2005)
Caragea D., Silvescu, A., Pathak, J., Bao, J., Andorf, C., Yan, C., Dobbs, D., & Honavar, V.
http://www.cild.iastate.edu/software/indus.html
PPIDB: Protein-Protein Interface Database (2006)
Wu, F., Zaback, P., Yan, C., Pathak, J., Dobbs, D., Honavar, V.
http://ppidb.cs.iastate.edu/